bioRxiv (2023) [ DOI: 10.1101/2023.05.31.542975 ]
Image sets:
- Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale, large box, small pixel
- Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale, medium box, small pixel
- Volumetric subtomograms of ribosomes extracted from EMPIAR-10499 at intramolecular scale
- Volumetric subtomograms of ribosome•SecDF complex extracted from EMPIAR-10499 at intramolecular scale
- Image tilt-series subtomograms of ribosomes extracted from EMPIAR-10499 at intermolecular scale
- Image tilt-series of ribosomes extracted from EMPIAR-10499 at intramolecular scale, small box, large pixel
Human heavy-chain holoferritin refined in C1 from cryo-ET data filtered by tomoDRGN
bioRxiv (2023) [ Pubmed: 37398315 DOI: doi:10.1101/2023.05.31.542975 ]
Human heavy-chain apoferritin refined in C1 from cryo-ET data filtered by tomoDRGN
bioRxiv (2023) [ Pubmed: 37398315 DOI: doi:10.1101/2023.05.31.542975 ]
Membrane-associated 70S ribosome in complex with SecDF
bioRxiv (2023) [ Pubmed: 37398315 DOI: doi:10.1101/2023.05.31.542975 ]
Full-length ClpX AAA protein in a complex with ClpP peptidase
Cryo-EM structure of substrate-free DNClpX.ClpP from singly capped particles
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8e7v
Q-score: 0.468
Ghanbarpour A, Cohen S, Davis JH, Sauer RT
Nat Commun (2023) [ ]
- Clpxp aaa protease (Complex from Escherichia coli)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx (42 kDa, Protein from Escherichia coli)
Cryo-EM structure of substrate-free DNClpX.ClpP
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8e8q
Q-score: 0.452
Ghanbarpour A, Cohen S, Davis JH, Sauer RT
Nat Commun (2023) [ ]
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx (42 kDa, Protein from Escherichia coli)
- Clpxp aaa + protease (Complex from Escherichia coli)
Cryo-EM structure of substrate-free ClpX.ClpP
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8e91
Q-score: 0.517
Ghanbarpour A, Cohen S, Davis JH, Sauer RT
Nat Commun (2023) [ ]
- Clpxp aaa protease (Complex from Escherichia coli)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Atp-dependent clp protease atp-binding subunit clpx (46 kDa, Protein from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- Atp-dependent clp protease proteolytic subunit (23 kDa, Protein from Escherichia coli)
- Adenosine-5'-diphosphate (427 Da, Ligand)
Cryo-EM particle stacks of the small dataset of ∆KsgA 30S plus KsgA sample
Sun J, Kinman LF, Jahagirdar D, Ortega J, Davis JH
Nat Struct Mol Biol (2023) [ DOI: 10.1038/s41594-023-01078-5 Pubmed: 37653244 ]
Image sets:
Cryo-EM particle stacks of the large dataset of ∆KsgA 30S plus KsgA sample
Sun J, Kinman LF, Jahagirdar D, Ortega J, Davis JH
Nat Struct Mol Biol (2023) [ DOI: 10.1038/s41594-023-01078-5 Pubmed: 37653244 ]
Image sets: